pyiron_base.jobs.job package

Subpackages

• pyiron_base.jobs.job.extension package
  • Subpackages
    • pyiron_base.jobs.job.extension.server package
      • Submodules
      • Module contents
  • Submodules
    • pyiron_base.jobs.job.extension.executable module
      • Executable
    • pyiron_base.jobs.job.extension.files module
      • File
      • FileBrowser
    • pyiron_base.jobs.job.extension.jobstatus module
      • JobStatus
      • format_docstring_with_statuses()
  • Module contents

Submodules

• pyiron_base.jobs.job.core module
  • DatabaseProperties
  • HDF5Content
  • JobCore
    • JobCore.check_if_job_exists()
    • JobCore.child_ids
    • JobCore.compress()
    • JobCore.content
    • JobCore.copy()
    • JobCore.copy_to()
    • JobCore.database_entry
    • JobCore.decompress()
    • JobCore.files
    • JobCore.files_to_compress
    • JobCore.files_to_remove
    • JobCore.from_hdf()
    • JobCore.get()
    • JobCore.get_from_table()
    • JobCore.get_job_id()
    • JobCore.id
    • JobCore.inspect()
    • JobCore.is_compressed()
    • JobCore.is_master_id()
    • JobCore.is_self_archived()
    • JobCore.job_id
    • JobCore.job_info_str
    • JobCore.job_name
    • JobCore.list_childs()
    • JobCore.list_files()
    • JobCore.load()
    • JobCore.master_id
    • JobCore.move_to()
    • JobCore.name
    • JobCore.parent_id
    • JobCore.path
    • JobCore.project
    • JobCore.project_hdf5
    • JobCore.relocate_hdf5()
    • JobCore.remove()
    • JobCore.remove_child()
    • JobCore.rename()
    • JobCore.reset_job_id()
    • JobCore.save()
    • JobCore.self_archive()
    • JobCore.self_unarchive()
    • JobCore.show_hdf()
    • JobCore.status
    • JobCore.to_hdf()
    • JobCore.to_object()
    • JobCore.working_directory
  • recursive_load_from_hdf()
• pyiron_base.jobs.job.factory module
  • JobFactory
  • JobFactoryCore
• pyiron_base.jobs.job.generic module
  • GenericError
    • GenericError.print_message()
    • GenericError.print_queue()
  • GenericJob
    • GenericJob.check_setup()
    • GenericJob.clear_job()
    • GenericJob.collect_logfiles()
    • GenericJob.collect_output()
    • GenericJob.convergence_check()
    • GenericJob.copy()
    • GenericJob.copy_file_to_working_directory()
    • GenericJob.copy_template()
    • GenericJob.copy_to()
    • GenericJob.create_job()
    • GenericJob.db_entry()
    • GenericJob.drop_status_to_aborted()
    • GenericJob.exclude_groups_hdf
    • GenericJob.exclude_nodes_hdf
    • GenericJob.executable
    • GenericJob.executor_type
    • GenericJob.from_dict()
    • GenericJob.from_hdf()
    • GenericJob.from_hdf_args()
    • GenericJob.interactive_close()
    • GenericJob.interactive_fetch()
    • GenericJob.interactive_flush()
    • GenericJob.job_file_name()
    • GenericJob.job_type
    • GenericJob.kill()
    • GenericJob.logger
    • GenericJob.queue_id
    • GenericJob.refresh_job_status()
    • GenericJob.remove()
    • GenericJob.remove_and_reset_id()
    • GenericJob.remove_child()
    • GenericJob.reset_job_id()
    • GenericJob.restart()
    • GenericJob.restart_file_dict
    • GenericJob.restart_file_list
    • GenericJob.run()
    • GenericJob.run_if_interactive()
    • GenericJob.run_if_interactive_non_modal()
    • GenericJob.run_if_modal()
    • GenericJob.run_if_refresh()
    • GenericJob.run_if_scheduler()
    • GenericJob.run_static()
    • GenericJob.run_time_to_db()
    • GenericJob.save()
    • GenericJob.send_to_database()
    • GenericJob.server
    • GenericJob.set_input_to_read_only()
    • GenericJob.signal_intercept()
    • GenericJob.suspend()
    • GenericJob.to_dict()
    • GenericJob.to_hdf()
    • GenericJob.transfer_from_remote()
    • GenericJob.update_master()
    • GenericJob.validate_ready_to_run()
    • GenericJob.version
    • GenericJob.working_directory
    • GenericJob.write_input()
• pyiron_base.jobs.job.interactive module
  • InteractiveBase
    • InteractiveBase.from_hdf()
    • InteractiveBase.interactive_close()
    • InteractiveBase.interactive_flush()
    • InteractiveBase.interactive_flush_frequency
    • InteractiveBase.interactive_is_activated()
    • InteractiveBase.interactive_open()
    • InteractiveBase.interactive_store_in_cache()
    • InteractiveBase.interactive_write_frequency
    • InteractiveBase.run_if_interactive()
    • InteractiveBase.run_if_interactive_non_modal()
    • InteractiveBase.to_hdf()
    • InteractiveBase.validate_ready_to_run()
• pyiron_base.jobs.job.jobtype module
  • JobFactory
  • JobType
    • JobType.convert_str_to_class()
    • JobType.register()
    • JobType.unregister()
  • JobTypeChoice
    • JobTypeChoice.job_class_dict
• pyiron_base.jobs.job.path module
  • JobPath
    • JobPath.base_name
    • JobPath.close()
    • JobPath.create_group()
    • JobPath.file_path
    • JobPath.from_db_entry()
    • JobPath.from_job_id()
    • JobPath.groups()
    • JobPath.h5_path
    • JobPath.is_empty
    • JobPath.is_root
    • JobPath.items()
    • JobPath.keys()
    • JobPath.list_dirs()
    • JobPath.listdirs()
    • JobPath.nodes()
    • JobPath.open()
    • JobPath.put()
    • JobPath.remove_file()
    • JobPath.values()
• pyiron_base.jobs.job.runfunction module
  • execute_job_with_external_executable()
  • handle_failed_job()
  • handle_finished_job()
  • multiprocess_wrapper()
  • run_job_with_parameter_repair()
  • run_job_with_runmode_executor()
  • run_job_with_runmode_executor_flux()
  • run_job_with_runmode_executor_futures()
  • run_job_with_runmode_manually()
  • run_job_with_runmode_modal()
  • run_job_with_runmode_non_modal()
  • run_job_with_runmode_queue()
  • run_job_with_runmode_srun()
  • run_job_with_status_busy()
  • run_job_with_status_collect()
  • run_job_with_status_created()
  • run_job_with_status_finished()
  • run_job_with_status_initialized()
  • run_job_with_status_refresh()
  • run_job_with_status_running()
  • run_job_with_status_submitted()
  • run_job_with_status_suspended()
  • run_time_decorator()
• pyiron_base.jobs.job.template module
  • PythonTemplateJob
  • TemplateJob
    • TemplateJob.from_hdf()
    • TemplateJob.input
    • TemplateJob.output
    • TemplateJob.to_hdf()
• pyiron_base.jobs.job.toolkit module
  • BaseTools
    • BaseTools.job
  • Toolkit
• pyiron_base.jobs.job.util module
• pyiron_base.jobs.job.wrapper module
  • JobWrapper
    • JobWrapper.run()
    • JobWrapper.setup_logger()
  • job_wrapper_function()

Module contents