Index

_

__init__() (pyiron_base.database.filetable.FileTable method) (pyiron_base.database.filetable.FileTableSingleton method) (pyiron_base.database.generic.AutorestoredConnection method) (pyiron_base.database.generic.ConnectionWatchDog method) (pyiron_base.database.generic.DatabaseAccess method) (pyiron_base.database.interface.IsDatabase method) (pyiron_base.database.manager.DatabaseManager method) (pyiron_base.interfaces.factory.PyironFactory method) (pyiron_base.interfaces.has_dict.HasDict method) (pyiron_base.interfaces.has_dict.HasDictfromHDF method) (pyiron_base.interfaces.has_dict.HasHDFfromDict method) (pyiron_base.interfaces.has_groups.HasGroups method) (pyiron_base.interfaces.has_hdf.HasHDF method) (pyiron_base.interfaces.lockable.Lockable method) (pyiron_base.interfaces.object.HasDatabase method) (pyiron_base.interfaces.object.HasStorage method) (pyiron_base.interfaces.object.PyironObject method) (pyiron_base.jobs.datamining.FunctionContainer method) (pyiron_base.jobs.datamining.JobFilters method) (pyiron_base.jobs.datamining.PyironTable method) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.DatabaseProperties method) (pyiron_base.jobs.job.base.HDF5Content method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.extension.executable.Executable method) (pyiron_base.jobs.job.extension.files.File method) (pyiron_base.jobs.job.extension.files.FileBrowser method) (pyiron_base.jobs.job.extension.jobstatus.JobStatus method) (pyiron_base.jobs.job.extension.server.generic.Server method) (pyiron_base.jobs.job.extension.server.runmode.Runmode method) (pyiron_base.jobs.job.factory.JobFactory method) (pyiron_base.jobs.job.factory.JobFactoryCore method) (pyiron_base.jobs.job.generic.GenericError method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.jobtype.JobFactory method) (pyiron_base.jobs.job.jobtype.JobType method) (pyiron_base.jobs.job.jobtype.JobTypeChoice method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.runfunction.CalculateFunctionCaller method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.job.toolkit.BaseTools method) (pyiron_base.jobs.job.toolkit.Toolkit method) (pyiron_base.jobs.job.wrapper.JobWrapper method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.GenericOutput method) (pyiron_base.jobs.master.parallel.JobGenerator method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.master.submissionstatus.SubmissionStatus method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.maintenance.databaseperformance.DatabaseStatistics method) (pyiron_base.maintenance.generic.GlobalMaintenance method) (pyiron_base.maintenance.generic.LocalMaintenance method) (pyiron_base.maintenance.generic.Maintenance method) (pyiron_base.maintenance.generic.UpdateMaintenance method) (pyiron_base.project.condaenv.CondaEnvironment method) (pyiron_base.project.data.ProjectData method) (pyiron_base.project.delayed.DelayedObject method) (pyiron_base.project.delayed.JobFuture method) (pyiron_base.project.delayed.Selector method) (pyiron_base.project.external.Notebook method) (pyiron_base.project.generic.Creator method) (pyiron_base.project.generic.Project method) (pyiron_base.project.jobloader.JobInspector method) (pyiron_base.project.jobloader.JobLoader method) (pyiron_base.project.path.GenericPath method) (pyiron_base.project.path.ProjectPath method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.filedata.FileData method) (pyiron_base.storage.filedata.FileDataTemplate method) (pyiron_base.storage.filedata.FileLoader method) (pyiron_base.storage.filedata.OwnNotebookNode method) (pyiron_base.storage.fileio.FileAdapter method) (pyiron_base.storage.flattenedstorage.FlattenedStorage method) (pyiron_base.storage.has_stored_traits.ABCTraitsMeta method) (pyiron_base.storage.has_stored_traits.HasStoredTraits method) (pyiron_base.storage.hdfio.BaseHDFio method) (pyiron_base.storage.hdfio.DummyHDFio method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.hdfstub.HDFStub method) (pyiron_base.storage.inputlist.InputList method) (pyiron_base.storage.parameters.GenericParameters method) (pyiron_base.utils.parser.Logstatus method) (pyiron_base.utils.parser.LogTag method) (pyiron_base.utils.units.PyironUnitRegistry method) (pyiron_base.utils.units.UnitConverter method)

A

ABCTraitsMeta (class in pyiron_base.storage.has_stored_traits) abspath() (pyiron_base.jobs.job.extension.files.File method) accepted_return_codes (pyiron_base.jobs.job.extension.executable.Executable property) add (pyiron_base.jobs.datamining.TableJob property) add_array() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) add_chunk() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) add_column() (pyiron_base.database.generic.DatabaseAccess method) add_done_callback() (pyiron_base.project.delayed.JobFuture method) add_item_dict() (pyiron_base.database.filetable.FileTable method) (pyiron_base.database.generic.DatabaseAccess method) add_labels() (pyiron_base.utils.units.PyironUnitRegistry method) add_module_conversion() (in module pyiron_base.maintenance.generic) add_quantity() (pyiron_base.utils.units.PyironUnitRegistry method) add_traits() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) allow_new_attr() (pyiron_base.storage.filedata.OwnNotebookNode method) always_true() (in module pyiron_base.jobs.datamining)

always_true_pandas() (in module pyiron_base.jobs.datamining) analysis_project (pyiron_base.jobs.datamining.TableJob property) append() (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.inputlist.InputList method) (pyiron_base.utils.parser.Logstatus method) apply_func() (pyiron_base.utils.parser.LogTag method) arg() (pyiron_base.utils.parser.LogTag method) attribute (pyiron_base.jobs.script.ScriptJob attribute) AutorestoredConnection (class in pyiron_base.database.generic) available_versions (pyiron_base.jobs.job.extension.executable.Executable property)

B

base_name (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.project.generic.Project attribute), [1] (pyiron_base.project.generic.Project property) (pyiron_base.project.path.GenericPath property) (pyiron_base.project.path.ProjectPath attribute) (pyiron_base.project.path.ProjectPath property) (pyiron_base.storage.hdfio.FileHDFio attribute) (pyiron_base.storage.hdfio.FileHDFio property) (pyiron_base.storage.hdfio.ProjectHDFio property)

base_to_code() (pyiron_base.utils.units.UnitConverter method) base_to_code_pint() (pyiron_base.utils.units.UnitConverter method) base_to_code_value() (pyiron_base.utils.units.UnitConverter method) base_to_current() (pyiron_base.maintenance.generic.UpdateMaintenance method) base_units() (pyiron_base.utils.units.UnitConverter method) base_v0_3_to_v0_4() (pyiron_base.maintenance.generic.UpdateMaintenance method) BaseHDFio (class in pyiron_base.storage.hdfio) BaseTools (class in pyiron_base.jobs.job.toolkit)

C

calculate_kwargs (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) CalculateFunctionCaller (class in pyiron_base.jobs.job.runfunction) cancel() (pyiron_base.project.delayed.JobFuture method) cancelled() (pyiron_base.project.delayed.JobFuture method) change_column_type() (pyiron_base.database.generic.DatabaseAccess method) check_if_job_exists() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) check_setup() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) child_hdf() (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) child_ids (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) child_names (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) child_project (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) class_own_trait_events() (pyiron_base.storage.has_stored_traits.HasStoredTraits class method) class_own_traits() (pyiron_base.storage.has_stored_traits.HasStoredTraits class method) class_trait_names() (pyiron_base.storage.has_stored_traits.HasStoredTraits class method) class_traits() (pyiron_base.storage.has_stored_traits.HasStoredTraits class method) clear() (pyiron_base.jobs.master.parallel.GenericOutput method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.filedata.OwnNotebookNode method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) clear_all() (pyiron_base.storage.parameters.GenericParameters method) clear_job() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) close() (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.project.generic.Project method) (pyiron_base.project.path.ProjectPath method) (pyiron_base.storage.hdfio.DummyHDFio method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) close_connection() (pyiron_base.database.manager.DatabaseManager method) code_to_base() (pyiron_base.utils.units.UnitConverter method) code_to_base_pint() (pyiron_base.utils.units.UnitConverter method) code_to_base_value() (pyiron_base.utils.units.UnitConverter method) code_units() (pyiron_base.utils.units.UnitConverter method) collect_logfiles() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) collect_output() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) combine_mat() (pyiron_base.utils.parser.Logstatus method) combine_xyz() (pyiron_base.utils.parser.Logstatus method) comment_char (pyiron_base.storage.parameters.GenericParameters property) compress() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method)

compress_jobs() (pyiron_base.project.generic.Project method) conda_environment_name (pyiron_base.jobs.job.extension.server.generic.Server property) conda_environment_path (pyiron_base.jobs.job.extension.server.generic.Server property) CondaEnvironment (class in pyiron_base.project.condaenv) connection_timeout (pyiron_base.database.manager.DatabaseManager property) ConnectionWatchDog (class in pyiron_base.database.generic) convergence_check() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) convert_str_to_class() (pyiron_base.jobs.job.jobtype.JobType static method) convert_to_object (pyiron_base.jobs.datamining.TableJob property) convert_unit() (pyiron_base.utils.parser.Logstatus method) copy() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.GenericOutput method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.data.ProjectData method) (pyiron_base.project.generic.Project method) (pyiron_base.project.path.GenericPath method) (pyiron_base.project.path.ProjectPath method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.filedata.OwnNotebookNode method) (pyiron_base.storage.flattenedstorage.FlattenedStorage method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) copy_file_to_working_directory() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) copy_files_to_archive() (in module pyiron_base.project.archiving.export_archive) copy_h5_files() (in module pyiron_base.project.archiving.export_archive) copy_template() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) copy_to() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) cores (pyiron_base.jobs.job.extension.server.generic.Server property) count() (pyiron_base.storage.fileio.FileAdapter method) create() (pyiron_base.project.condaenv.CondaEnvironment method) create_child_job() (pyiron_base.jobs.master.parallel.ParallelMaster method) create_from_dict() (in module pyiron_base.interfaces.has_dict) create_from_job() (pyiron_base.project.generic.Project method) create_group() (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.project.data.ProjectData method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.hdfio.DummyHDFio method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) create_hdf() (pyiron_base.project.generic.Project static method) (pyiron_base.storage.hdfio.ProjectHDFio method) create_job() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.generic.Project method) create_job_class() (pyiron_base.project.generic.Project static method) create_job_factory() (in module pyiron_base.jobs.flex.factory) create_project_from_hdf5() (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) create_table() (pyiron_base.jobs.datamining.PyironTable method) (pyiron_base.project.generic.Project method) create_working_directory() (pyiron_base.storage.hdfio.ProjectHDFio method) Creator (class in pyiron_base.project.generic) cross_validation_lock (pyiron_base.storage.has_stored_traits.HasStoredTraits property) current (pyiron_base.utils.parser.LogTag property)

D

daemon (pyiron_base.database.generic.ConnectionWatchDog property) data (pyiron_base.project.generic.Project attribute) (pyiron_base.storage.filedata.FileData property) (pyiron_base.storage.filedata.FileDataTemplate property) database (pyiron_base.jobs.job.extension.jobstatus.JobStatus property) (pyiron_base.jobs.master.submissionstatus.SubmissionStatus property) DatabaseAccess (class in pyiron_base.database.generic) DatabaseManager (class in pyiron_base.database.manager) DatabaseProperties (class in pyiron_base.jobs.job.base) DatabaseStatistics (class in pyiron_base.maintenance.databaseperformance) DataContainer (class in pyiron_base.storage.datacontainer) DataContainerBase (class in pyiron_base.storage.datacontainer) db (pyiron_base.project.generic.Project attribute) (pyiron_base.storage.hdfio.ProjectHDFio property) db_entry() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.extension.server.generic.Server method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) db_filter_function (pyiron_base.jobs.datamining.PyironTable property) (pyiron_base.jobs.datamining.TableJob property) decompress() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method)

default_version (pyiron_base.jobs.job.extension.executable.Executable property) define_blocks() (pyiron_base.storage.parameters.GenericParameters method) defragment_storage() (pyiron_base.maintenance.generic.LocalMaintenance method) del_array() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) DelayedObject (class in pyiron_base.project.delayed) delete_item() (pyiron_base.database.filetable.FileTable method) (pyiron_base.database.generic.DatabaseAccess method) delete_output_files_jobs() (pyiron_base.project.generic.Project method) detect_bug() (in module pyiron_base.maintenance.update.pyiron_base_03x_to_04x) dict() (pyiron_base.storage.filedata.OwnNotebookNode method) disable_mpi4py() (pyiron_base.jobs.script.ScriptJob method) done() (pyiron_base.project.delayed.JobFuture method) draw() (in module pyiron_base.project.delayed) drop_status_to_aborted() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) dtype_dict (pyiron_base.utils.units.PyironUnitRegistry property) (pyiron_base.utils.units.PyironUnitRegistry.self attribute) DummyHDFio (class in pyiron_base.storage.hdfio) dump() (in module pyiron_base.project.external) dyn_tags (pyiron_base.utils.parser.LogTag property)

E

enable_mpi4py() (pyiron_base.jobs.script.ScriptJob method) end_value_char (pyiron_base.storage.parameters.GenericParameters property) enforce_update (pyiron_base.jobs.datamining.TableJob property) evaluate_function() (in module pyiron_base.project.delayed) exception() (pyiron_base.project.delayed.JobFuture method) exclude_groups_hdf (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) exclude_nodes_hdf (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property)

Executable (class in pyiron_base.jobs.job.extension.executable) executable (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) executable_path (pyiron_base.jobs.job.extension.executable.Executable property) ExecutableContainerJob (class in pyiron_base.jobs.flex.executablecontainer) execute_command_with_error_handling() (in module pyiron_base.jobs.job.runfunction) execute_job_with_calculate_function() (in module pyiron_base.jobs.job.runfunction) execute_job_with_external_executable() (in module pyiron_base.jobs.job.runfunction) execute_subprocess() (in module pyiron_base.jobs.job.runfunction) executor (pyiron_base.jobs.job.extension.server.generic.Server property) export_database() (in module pyiron_base.project.archiving.export_archive) extend() (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.flattenedstorage.FlattenedStorage method) (pyiron_base.storage.inputlist.InputList method) extract_data_from_file() (in module pyiron_base.utils.parser) extract_data_from_str_lst() (in module pyiron_base.utils.parser) extract_file() (pyiron_base.utils.parser.Logstatus method) extract_from_list() (pyiron_base.utils.parser.Logstatus method) extract_item() (pyiron_base.utils.parser.Logstatus static method)

F

File (class in pyiron_base.jobs.job.extension.files) file_exists (pyiron_base.storage.hdfio.FileHDFio attribute) (pyiron_base.storage.hdfio.FileHDFio property) (pyiron_base.storage.hdfio.ProjectHDFio property) file_name (pyiron_base.storage.hdfio.FileHDFio attribute) (pyiron_base.storage.hdfio.FileHDFio property) (pyiron_base.storage.hdfio.ProjectHDFio property) (pyiron_base.storage.parameters.GenericParameters property) file_path (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.storage.hdfio.FileHDFio attribute) (pyiron_base.storage.hdfio.FileHDFio property) (pyiron_base.storage.hdfio.ProjectHDFio property) file_size() (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) FileAdapter (class in pyiron_base.storage.fileio) FileBrowser (class in pyiron_base.jobs.job.extension.files) FileData (class in pyiron_base.storage.filedata) FileDataTemplate (class in pyiron_base.storage.filedata) FileHDFio (class in pyiron_base.storage.hdfio) FileLoader (class in pyiron_base.storage.filedata) files (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) FileTable (class in pyiron_base.database.filetable) FileTableSingleton (class in pyiron_base.database.filetable) filter (pyiron_base.jobs.datamining.PyironTable property) filter_function (pyiron_base.jobs.datamining.PyironTable property) (pyiron_base.jobs.datamining.TableJob property) filter_function() (in module pyiron_base.database.filetable) find_chunk() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) finished (pyiron_base.jobs.master.submissionstatus.SubmissionStatus property) first_child_name() (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) FlattenedStorage (class in pyiron_base.storage.flattenedstorage) FlexibleMaster (class in pyiron_base.jobs.master.flexible) force_reset() (pyiron_base.database.filetable.FileTable method) format_docstring_with_statuses() (in module pyiron_base.jobs.job.extension.jobstatus) from_db_entry() (pyiron_base.jobs.job.path.JobPath class method) from_dict() (pyiron_base.interfaces.has_dict.HasDict method) (pyiron_base.interfaces.has_dict.HasDictfromHDF method) (pyiron_base.interfaces.has_dict.HasHDFfromDict method) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.extension.executable.Executable method) (pyiron_base.jobs.job.extension.server.generic.Server method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.flattenedstorage.FlattenedStorage method) (pyiron_base.storage.inputlist.InputList method) (pyiron_base.storage.parameters.GenericParameters method)

from_hdf() (pyiron_base.interfaces.has_dict.HasDictfromHDF method) (pyiron_base.interfaces.has_dict.HasHDFfromDict method) (pyiron_base.interfaces.has_hdf.HasHDF method) (pyiron_base.interfaces.object.HasStorage method) (pyiron_base.interfaces.object.PyironObject method) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.extension.server.generic.Server method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.flattenedstorage.FlattenedStorage method) (pyiron_base.storage.has_stored_traits.HasStoredTraits method) (pyiron_base.storage.inputlist.InputList method) (pyiron_base.storage.parameters.GenericParameters method) from_hdf_args() (pyiron_base.interfaces.has_dict.HasDictfromHDF class method) (pyiron_base.interfaces.has_dict.HasHDFfromDict class method) (pyiron_base.interfaces.has_hdf.HasHDF class method) (pyiron_base.interfaces.object.HasStorage class method) (pyiron_base.interfaces.object.PyironObject class method) (pyiron_base.jobs.datamining.TableJob class method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob class method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob class method) (pyiron_base.jobs.job.generic.GenericJob class method) (pyiron_base.jobs.job.interactive.InteractiveBase class method) (pyiron_base.jobs.job.template.PythonTemplateJob class method) (pyiron_base.jobs.job.template.TemplateJob class method) (pyiron_base.jobs.master.flexible.FlexibleMaster class method) (pyiron_base.jobs.master.generic.GenericMaster class method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper class method) (pyiron_base.jobs.master.list.ListMaster class method) (pyiron_base.jobs.master.parallel.ParallelMaster class method) (pyiron_base.jobs.script.ScriptJob class method) (pyiron_base.jobs.worker.WorkerJob class method) (pyiron_base.project.data.ProjectData class method) (pyiron_base.storage.datacontainer.DataContainer class method) (pyiron_base.storage.flattenedstorage.FlattenedStorage class method) (pyiron_base.storage.has_stored_traits.HasStoredTraits class method) (pyiron_base.storage.inputlist.InputList class method) from_job_id() (pyiron_base.jobs.job.path.JobPath class method) fromkeys() (pyiron_base.jobs.master.parallel.GenericOutput method) (pyiron_base.storage.filedata.OwnNotebookNode method) FunctionContainer (class in pyiron_base.jobs.datamining) future (pyiron_base.jobs.job.extension.server.generic.Server property)

G

GenericError (class in pyiron_base.jobs.job.generic) GenericJob (class in pyiron_base.jobs.job.generic) GenericMaster (class in pyiron_base.jobs.master.generic) GenericOutput (class in pyiron_base.jobs.master.parallel) GenericParameters (class in pyiron_base.storage.parameters) GenericPath (class in pyiron_base.project.path) get() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.GenericOutput method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.filedata.OwnNotebookNode method) (pyiron_base.storage.hdfio.DummyHDFio method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) (pyiron_base.storage.parameters.GenericParameters method) get_array() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) get_array_filled() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) get_array_ragged() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) get_attribute() (pyiron_base.storage.parameters.GenericParameters method) get_calculate_function() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) get_child_cores() (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) get_child_ids() (in module pyiron_base.database.jobtable) (pyiron_base.database.filetable.FileTable method) (pyiron_base.project.generic.Project method) get_database_statistics() (in module pyiron_base.maintenance.databaseperformance) get_dataframe() (in module pyiron_base.project.archiving.import_archive) (pyiron_base.jobs.datamining.TableJob method) get_db_columns() (pyiron_base.database.filetable.FileTable method) (pyiron_base.database.generic.DatabaseAccess method) (pyiron_base.database.interface.IsDatabase method) (pyiron_base.project.generic.Project method) get_dtype() (pyiron_base.utils.units.PyironUnitRegistry method) get_dtype_and_fill() (in module pyiron_base.storage.flattenedstorage) get_external_input() (pyiron_base.project.generic.Project static method) get_extract() (pyiron_base.database.filetable.FileTable static method) get_folder_size() (in module pyiron_base.project.size) get_from_table() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method)

get_function_from_string() (in module pyiron_base.jobs.master.generic) get_function_parameter_dict() (in module pyiron_base.project.delayed) get_graph() (in module pyiron_base.project.delayed) get_hamilton_from_file() (in module pyiron_base.database.filetable) get_hamilton_version_from_file() (in module pyiron_base.database.filetable) get_hash() (in module pyiron_base.project.delayed) get_historical_table() (in module pyiron_base.database.tables) get_input_for_subprocess_call() (pyiron_base.jobs.job.extension.executable.Executable method) get_input_parameter_dict() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) get_item() (pyiron_base.utils.parser.LogTag method) get_item_by_id() (pyiron_base.database.filetable.FileTable method) (pyiron_base.database.generic.DatabaseAccess method) get_items_dict() (pyiron_base.database.filetable.FileTable method) (pyiron_base.database.generic.DatabaseAccess method) get_job_id() (in module pyiron_base.database.jobtable) (in module pyiron_base.jobs.datamining) (pyiron_base.database.filetable.FileTable method) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.hdfio.ProjectHDFio method) get_job_ids() (pyiron_base.database.filetable.FileTable method) (pyiron_base.database.generic.DatabaseAccess method) (pyiron_base.database.interface.IsDatabase method) (pyiron_base.project.generic.Project method) get_job_status() (in module pyiron_base.database.jobtable) (pyiron_base.database.filetable.FileTable method) (pyiron_base.project.generic.Project method) get_job_status_from_file() (in module pyiron_base.database.filetable) get_job_working_directory() (in module pyiron_base.database.jobtable) (pyiron_base.database.filetable.FileTable method) (pyiron_base.project.generic.Project method) get_jobs() (pyiron_base.database.filetable.FileTable method) (pyiron_base.database.generic.DatabaseAccess method) (pyiron_base.database.interface.IsDatabase method) (pyiron_base.project.generic.Project method) get_jobs_status() (pyiron_base.project.generic.Project method) get_node_name() (in module pyiron_base.project.delayed) get_pandas() (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.parameters.GenericParameters method) get_project_size() (pyiron_base.project.generic.Project method) get_repository_status() (pyiron_base.maintenance.generic.Maintenance static method) get_size() (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) get_string_lst() (pyiron_base.storage.parameters.GenericParameters method) get_table_headings() (pyiron_base.database.filetable.FileTable method) (pyiron_base.database.generic.DatabaseAccess method) (pyiron_base.database.interface.IsDatabase method) getName() (pyiron_base.database.generic.ConnectionWatchDog method) GlobalMaintenance (class in pyiron_base.maintenance.generic) gpus (pyiron_base.jobs.job.extension.server.generic.Server property) groups() (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.project.data.ProjectData method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method)

H

h5() (pyiron_base.utils.parser.LogTag method) h5_dict (pyiron_base.utils.parser.LogTag property) h5_path (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.storage.hdfio.FileHDFio attribute) (pyiron_base.storage.hdfio.FileHDFio property) (pyiron_base.storage.hdfio.ProjectHDFio property) handle_failed_job() (in module pyiron_base.jobs.job.runfunction) handle_finished_job() (in module pyiron_base.jobs.job.runfunction) has_array() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) has_keys() (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.inputlist.InputList method) has_trait() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) hasattr() (pyiron_base.storage.filedata.OwnNotebookNode method) HasDatabase (class in pyiron_base.interfaces.object)

HasDict (class in pyiron_base.interfaces.has_dict) HasDictfromHDF (class in pyiron_base.interfaces.has_dict) HasGroups (class in pyiron_base.interfaces.has_groups) HasHDF (class in pyiron_base.interfaces.has_hdf) HasHDFfromDict (class in pyiron_base.interfaces.has_dict) HasStorage (class in pyiron_base.interfaces.object) HasStoredTraits (class in pyiron_base.storage.has_stored_traits) hd_copy() (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) HDF5Content (class in pyiron_base.jobs.job.base) HDFStub (class in pyiron_base.storage.hdfstub) history (pyiron_base.project.generic.Project attribute), [1] (pyiron_base.project.generic.Project property) (pyiron_base.project.path.ProjectPath attribute) (pyiron_base.project.path.ProjectPath property) (pyiron_base.storage.hdfio.FileHDFio attribute) hold_trait_notifications() (pyiron_base.storage.has_stored_traits.HasStoredTraits method)

I

id (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) ident (pyiron_base.database.generic.ConnectionWatchDog property) import_class() (in module pyiron_base.utils.instance) import_jobs() (in module pyiron_base.project.archiving.import_archive) index() (pyiron_base.storage.fileio.FileAdapter method) init_table() (pyiron_base.database.filetable.FileTable method) initialized (pyiron_base.jobs.master.submissionstatus.SubmissionStatus property) InputList (class in pyiron_base.storage.inputlist) insert() (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.inputlist.InputList method) inspect() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.storage.hdfio.ProjectHDFio method) inspect_csv() (in module pyiron_base.project.archiving.import_archive) instantiate() (pyiron_base.interfaces.has_dict.HasDict class method) (pyiron_base.interfaces.has_dict.HasDictfromHDF class method) (pyiron_base.interfaces.has_dict.HasHDFfromDict class method) (pyiron_base.jobs.datamining.TableJob class method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob class method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob class method) (pyiron_base.jobs.job.extension.executable.Executable class method) (pyiron_base.jobs.job.extension.server.generic.Server class method) (pyiron_base.jobs.job.generic.GenericJob class method) (pyiron_base.jobs.job.interactive.InteractiveBase class method) (pyiron_base.jobs.job.template.PythonTemplateJob class method) (pyiron_base.jobs.job.template.TemplateJob class method) (pyiron_base.jobs.master.flexible.FlexibleMaster class method) (pyiron_base.jobs.master.generic.GenericMaster class method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper class method) (pyiron_base.jobs.master.list.ListMaster class method) (pyiron_base.jobs.master.parallel.ParallelMaster class method) (pyiron_base.jobs.script.ScriptJob class method) (pyiron_base.jobs.worker.WorkerJob class method) (pyiron_base.project.data.ProjectData class method) (pyiron_base.storage.datacontainer.DataContainer class method) (pyiron_base.storage.flattenedstorage.FlattenedStorage class method) (pyiron_base.storage.inputlist.InputList class method) (pyiron_base.storage.parameters.GenericParameters class method) interactive_close() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) interactive_fetch() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) interactive_flush() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method)

interactive_is_activated() (pyiron_base.jobs.job.interactive.InteractiveBase method) interactive_open() (pyiron_base.jobs.job.interactive.InteractiveBase method) interactive_ref_job_initialize() (pyiron_base.jobs.master.parallel.ParallelMaster method) interactive_store_in_cache() (pyiron_base.jobs.job.interactive.InteractiveBase method) InteractiveBase (class in pyiron_base.jobs.job.interactive) InteractiveWrapper (class in pyiron_base.jobs.master.interactivewrapper) is_alive() (pyiron_base.database.generic.ConnectionWatchDog method) is_compressed() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) is_empty (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.storage.hdfio.FileHDFio attribute) (pyiron_base.storage.hdfio.FileHDFio property) (pyiron_base.storage.hdfio.ProjectHDFio property) is_finished() (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) is_func() (pyiron_base.utils.parser.LogTag method) is_item() (pyiron_base.utils.parser.LogTag method) is_master_id() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) is_open (pyiron_base.storage.hdfio.FileHDFio attribute) is_root (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.storage.hdfio.FileHDFio attribute) (pyiron_base.storage.hdfio.FileHDFio property) (pyiron_base.storage.hdfio.ProjectHDFio property) is_self_archived() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) is_within_directory() (in module pyiron_base.utils.safetar) isDaemon() (pyiron_base.database.generic.ConnectionWatchDog method) IsDatabase (class in pyiron_base.database.interface) items() (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.master.parallel.GenericOutput method) (pyiron_base.project.data.ProjectData method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.filedata.OwnNotebookNode method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) iter_groups() (pyiron_base.project.generic.Project method) iter_jobs() (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.project.generic.Project method) iter_output() (pyiron_base.project.generic.Project method)

J

job() (in module pyiron_base.project.decorator) job_file_name() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) job_id (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.extension.jobstatus.JobStatus property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) job_info_str (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) job_name (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property)

job_name() (pyiron_base.jobs.master.parallel.JobGenerator method) (pyiron_base.project.generic.Creator static method) job_object_dict (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) job_status (pyiron_base.jobs.datamining.TableJob property) job_table() (pyiron_base.database.filetable.FileTable method) (pyiron_base.database.generic.DatabaseAccess method) (pyiron_base.database.interface.IsDatabase method) (pyiron_base.project.generic.Project method) job_type (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) (pyiron_base.project.generic.Project attribute) job_wrapper_function() (in module pyiron_base.jobs.job.wrapper) JobCore (class in pyiron_base.jobs.job.base) JobFactory (class in pyiron_base.jobs.job.factory) (class in pyiron_base.jobs.job.jobtype) JobFactoryCore (class in pyiron_base.jobs.job.factory) JobFilters (class in pyiron_base.jobs.datamining) JobFuture (class in pyiron_base.project.delayed) JobGenerator (class in pyiron_base.jobs.master.parallel) JobInspector (class in pyiron_base.project.jobloader) JobLoader (class in pyiron_base.project.jobloader) JobPath (class in pyiron_base.jobs.job.path) JobStatus (class in pyiron_base.jobs.job.extension.jobstatus) JobType (class in pyiron_base.jobs.job.jobtype) JobTypeChoice (class in pyiron_base.jobs.job.jobtype) JobWrapper (class in pyiron_base.jobs.job.wrapper) join() (pyiron_base.database.generic.ConnectionWatchDog method) (pyiron_base.storage.flattenedstorage.FlattenedStorage method)

K

key_dict (pyiron_base.utils.parser.LogTag property) keys() (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.master.parallel.GenericOutput method) (pyiron_base.project.data.ProjectData method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.filedata.OwnNotebookNode method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) (pyiron_base.storage.parameters.GenericParameters method) kick() (pyiron_base.database.generic.ConnectionWatchDog method) kill() (pyiron_base.database.generic.ConnectionWatchDog method) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method)

L

line_skip() (pyiron_base.utils.parser.LogTag method) list() (pyiron_base.jobs.job.extension.files.File method) (pyiron_base.jobs.job.extension.files.FileBrowser method) list_all() (pyiron_base.interfaces.has_groups.HasGroups method) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.data.ProjectData method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.hdfio.DummyHDFio method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) list_arrays() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) list_childs() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) list_clusters() (pyiron_base.project.generic.Project static method) list_dirs() (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) list_executables() (pyiron_base.jobs.job.extension.executable.Executable method) list_files() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.generic.Project method) list_groups() (pyiron_base.interfaces.has_groups.HasGroups method) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.data.ProjectData method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.hdfio.DummyHDFio method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method)

list_h5_path() (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) list_nodes() (pyiron_base.interfaces.has_groups.HasGroups method) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.data.ProjectData method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.hdfio.DummyHDFio method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) list_publications() (pyiron_base.project.generic.Project static method) list_queues() (pyiron_base.jobs.job.extension.server.generic.Server static method) listdir() (pyiron_base.project.generic.Project method) (pyiron_base.project.path.ProjectPath method) listdirs() (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) ListMaster (class in pyiron_base.jobs.master.list) load (pyiron_base.project.generic.Project property) load() (in module pyiron_base.project.external) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.storage.filedata.FileLoader method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.hdfstub.HDFStub method) load_default() (pyiron_base.storage.parameters.GenericParameters method) load_file() (in module pyiron_base.storage.filedata) load_from_jobpath() (pyiron_base.project.generic.Project method) (pyiron_base.storage.hdfio.ProjectHDFio method) load_from_jobpath_string() (pyiron_base.project.generic.Project static method) load_string() (pyiron_base.storage.parameters.GenericParameters method) LocalMaintenance (class in pyiron_base.maintenance.generic) lock() (pyiron_base.interfaces.lockable.Lockable method) (pyiron_base.jobs.job.extension.server.generic.Server method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.flattenedstorage.FlattenedStorage method) (pyiron_base.storage.has_stored_traits.HasStoredTraits method) (pyiron_base.storage.inputlist.InputList method) Lockable (class in pyiron_base.interfaces.lockable) Locked LockedWarning logger (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) Logstatus (class in pyiron_base.utils.parser) LogTag (class in pyiron_base.utils.parser)

M

main() (in module pyiron_base.cli.control) (in module pyiron_base.cli.cp) (in module pyiron_base.cli.install) (in module pyiron_base.cli.ls) (in module pyiron_base.cli.mv) (in module pyiron_base.cli.reloadfile) (in module pyiron_base.cli.rm) (in module pyiron_base.cli.wrapper) Maintenance (class in pyiron_base.maintenance.generic) mark() (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.inputlist.InputList method) master (pyiron_base.jobs.master.parallel.JobGenerator property) master_id (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) merge() (pyiron_base.storage.filedata.OwnNotebookNode method) mode (pyiron_base.jobs.job.extension.server.runmode.Runmode property) modify() (pyiron_base.storage.parameters.GenericParameters method) modify_job() (pyiron_base.jobs.master.parallel.JobGenerator static method) module pyiron_base pyiron_base.cli pyiron_base.cli.control pyiron_base.cli.cp pyiron_base.cli.install pyiron_base.cli.ls pyiron_base.cli.mv pyiron_base.cli.reloadfile pyiron_base.cli.rm pyiron_base.cli.wrapper pyiron_base.database pyiron_base.database.filetable pyiron_base.database.generic pyiron_base.database.interface pyiron_base.database.jobtable pyiron_base.database.manager pyiron_base.database.sqlcolumnlength pyiron_base.database.tables pyiron_base.interfaces pyiron_base.interfaces.factory pyiron_base.interfaces.has_dict pyiron_base.interfaces.has_groups pyiron_base.interfaces.has_hdf pyiron_base.interfaces.lockable pyiron_base.interfaces.object pyiron_base.jobs pyiron_base.jobs.datamining pyiron_base.jobs.dynamic pyiron_base.jobs.flex pyiron_base.jobs.flex.executablecontainer pyiron_base.jobs.flex.factory pyiron_base.jobs.flex.pythonfunctioncontainer pyiron_base.jobs.job pyiron_base.jobs.job.base pyiron_base.jobs.job.extension pyiron_base.jobs.job.extension.executable pyiron_base.jobs.job.extension.files pyiron_base.jobs.job.extension.jobstatus pyiron_base.jobs.job.extension.server pyiron_base.jobs.job.extension.server.generic pyiron_base.jobs.job.extension.server.queuestatus pyiron_base.jobs.job.extension.server.runmode pyiron_base.jobs.job.factory pyiron_base.jobs.job.generic pyiron_base.jobs.job.interactive pyiron_base.jobs.job.jobtype pyiron_base.jobs.job.path pyiron_base.jobs.job.runfunction pyiron_base.jobs.job.template pyiron_base.jobs.job.toolkit pyiron_base.jobs.job.util pyiron_base.jobs.job.wrapper pyiron_base.jobs.master pyiron_base.jobs.master.flexible pyiron_base.jobs.master.generic pyiron_base.jobs.master.interactivewrapper pyiron_base.jobs.master.list pyiron_base.jobs.master.parallel pyiron_base.jobs.master.submissionstatus pyiron_base.jobs.script pyiron_base.jobs.worker pyiron_base.maintenance pyiron_base.maintenance.databaseperformance pyiron_base.maintenance.generic pyiron_base.maintenance.update pyiron_base.maintenance.update.pyiron_base_03x_to_04x pyiron_base.project pyiron_base.project.archiving pyiron_base.project.archiving.export_archive pyiron_base.project.archiving.import_archive pyiron_base.project.condaenv pyiron_base.project.data pyiron_base.project.decorator pyiron_base.project.delayed pyiron_base.project.external pyiron_base.project.generic pyiron_base.project.jobloader pyiron_base.project.path pyiron_base.project.size pyiron_base.state pyiron_base.storage pyiron_base.storage.datacontainer pyiron_base.storage.filedata pyiron_base.storage.fileio pyiron_base.storage.flattenedstorage pyiron_base.storage.has_stored_traits pyiron_base.storage.hdfio pyiron_base.storage.hdfstub pyiron_base.storage.inputlist pyiron_base.storage.parameters pyiron_base.utils pyiron_base.utils.instance pyiron_base.utils.parser pyiron_base.utils.safetar pyiron_base.utils.strtobool pyiron_base.utils.units

move_to() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.generic.Project method) move_to_end() (pyiron_base.jobs.master.parallel.GenericOutput method) mpi (pyiron_base.jobs.job.extension.executable.Executable property) mro() (pyiron_base.database.filetable.FileTableSingleton method) (pyiron_base.storage.has_stored_traits.ABCTraitsMeta method) multi_word_separator (pyiron_base.storage.parameters.GenericParameters property) multiprocess_wrapper() (in module pyiron_base.jobs.job.runfunction)

N

name (pyiron_base.database.generic.ConnectionWatchDog property) (pyiron_base.jobs.datamining.PyironTable property) (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) (pyiron_base.project.generic.Project property) (pyiron_base.storage.hdfio.ProjectHDFio property)

native_id (pyiron_base.database.generic.ConnectionWatchDog property) new_hdf (pyiron_base.jobs.job.extension.server.generic.Server property) next() (pyiron_base.jobs.master.parallel.JobGenerator method) nodes() (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.project.data.ProjectData method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) Notebook (class in pyiron_base.project.external) notify_change() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) number_jobs_total (pyiron_base.jobs.master.parallel.ParallelMaster property)

O

observe() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) on_trait_change() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) open() (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.project.generic.Project method) (pyiron_base.project.path.ProjectPath method) (pyiron_base.storage.hdfio.DummyHDFio method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method)

open_connection() (pyiron_base.database.manager.DatabaseManager method) output_to_pandas() (pyiron_base.jobs.master.parallel.ParallelMaster method) OwnNotebookNode (class in pyiron_base.storage.filedata)

P

pack() (pyiron_base.project.generic.Project method) ParallelMaster (class in pyiron_base.jobs.master.parallel) parameter_list (pyiron_base.jobs.master.parallel.JobGenerator property) parent_group (pyiron_base.project.generic.Project attribute) (pyiron_base.project.generic.Project property) parent_id (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) parse (pyiron_base.storage.fileio.FileAdapter attribute) path (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) (pyiron_base.project.generic.Project attribute), [1] (pyiron_base.project.generic.Project property) (pyiron_base.project.path.GenericPath property) (pyiron_base.project.path.ProjectPath attribute) (pyiron_base.project.path.ProjectPath property) (pyiron_base.storage.hdfio.ProjectHDFio property) performance() (pyiron_base.maintenance.databaseperformance.DatabaseStatistics method) pop() (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.GenericOutput method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.filedata.OwnNotebookNode method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) popitem() (pyiron_base.jobs.master.parallel.GenericOutput method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.filedata.OwnNotebookNode method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) Project (class in pyiron_base.project.generic) project (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) (pyiron_base.storage.hdfio.ProjectHDFio property) project_hdf5 (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) project_path (pyiron_base.project.generic.Project attribute), [1] (pyiron_base.project.generic.Project property) (pyiron_base.project.path.GenericPath property) (pyiron_base.project.path.ProjectPath attribute) (pyiron_base.project.path.ProjectPath property) (pyiron_base.storage.hdfio.ProjectHDFio property) ProjectData (class in pyiron_base.project.data) ProjectHDFio (class in pyiron_base.storage.hdfio) ProjectPath (class in pyiron_base.project.path) put() (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) pyiron_base module pyiron_base.cli module pyiron_base.cli.control module pyiron_base.cli.cp module pyiron_base.cli.install module pyiron_base.cli.ls module pyiron_base.cli.mv module pyiron_base.cli.reloadfile module pyiron_base.cli.rm module pyiron_base.cli.wrapper module pyiron_base.database module pyiron_base.database.filetable module pyiron_base.database.generic module pyiron_base.database.interface module pyiron_base.database.jobtable module pyiron_base.database.manager module pyiron_base.database.sqlcolumnlength module pyiron_base.database.tables module pyiron_base.interfaces module pyiron_base.interfaces.factory module pyiron_base.interfaces.has_dict module pyiron_base.interfaces.has_groups module

pyiron_base.interfaces.has_hdf module pyiron_base.interfaces.lockable module pyiron_base.interfaces.object module pyiron_base.jobs module pyiron_base.jobs.datamining module pyiron_base.jobs.dynamic module pyiron_base.jobs.flex module pyiron_base.jobs.flex.executablecontainer module pyiron_base.jobs.flex.factory module pyiron_base.jobs.flex.pythonfunctioncontainer module pyiron_base.jobs.job module pyiron_base.jobs.job.base module pyiron_base.jobs.job.extension module pyiron_base.jobs.job.extension.executable module pyiron_base.jobs.job.extension.files module pyiron_base.jobs.job.extension.jobstatus module pyiron_base.jobs.job.extension.server module pyiron_base.jobs.job.extension.server.generic module pyiron_base.jobs.job.extension.server.queuestatus module pyiron_base.jobs.job.extension.server.runmode module pyiron_base.jobs.job.factory module pyiron_base.jobs.job.generic module pyiron_base.jobs.job.interactive module pyiron_base.jobs.job.jobtype module pyiron_base.jobs.job.path module pyiron_base.jobs.job.runfunction module pyiron_base.jobs.job.template module pyiron_base.jobs.job.toolkit module pyiron_base.jobs.job.util module pyiron_base.jobs.job.wrapper module pyiron_base.jobs.master module pyiron_base.jobs.master.flexible module pyiron_base.jobs.master.generic module pyiron_base.jobs.master.interactivewrapper module pyiron_base.jobs.master.list module pyiron_base.jobs.master.parallel module pyiron_base.jobs.master.submissionstatus module pyiron_base.jobs.script module pyiron_base.jobs.worker module pyiron_base.maintenance module pyiron_base.maintenance.databaseperformance module pyiron_base.maintenance.generic module pyiron_base.maintenance.update module pyiron_base.maintenance.update.pyiron_base_03x_to_04x module pyiron_base.project module pyiron_base.project.archiving module pyiron_base.project.archiving.export_archive module pyiron_base.project.archiving.import_archive module pyiron_base.project.condaenv module pyiron_base.project.data module pyiron_base.project.decorator module pyiron_base.project.delayed module pyiron_base.project.external module pyiron_base.project.generic module pyiron_base.project.jobloader module pyiron_base.project.path module pyiron_base.project.size module pyiron_base.state module pyiron_base.storage module pyiron_base.storage.datacontainer module pyiron_base.storage.filedata module pyiron_base.storage.fileio module pyiron_base.storage.flattenedstorage module pyiron_base.storage.has_stored_traits module pyiron_base.storage.hdfio module pyiron_base.storage.hdfstub module pyiron_base.storage.inputlist module pyiron_base.storage.parameters module pyiron_base.utils module pyiron_base.utils.instance module pyiron_base.utils.parser module pyiron_base.utils.safetar module pyiron_base.utils.strtobool module pyiron_base.utils.units module pyiron_base_03x_to_04x() (in module pyiron_base.maintenance.update.pyiron_base_03x_to_04x) PyironFactory (class in pyiron_base.interfaces.factory) PyironObject (class in pyiron_base.interfaces.object) PyironTable (class in pyiron_base.jobs.datamining) PyironUnitRegistry (class in pyiron_base.utils.units) PythonFunctionContainerJob (class in pyiron_base.jobs.flex.pythonfunctioncontainer) PythonTemplateJob (class in pyiron_base.jobs.job.template)

Q

quantity_dict (pyiron_base.utils.units.PyironUnitRegistry property) (pyiron_base.utils.units.PyironUnitRegistry.self attribute), [1] queue (pyiron_base.jobs.job.extension.server.generic.Server property) queue_check_job_is_waiting_or_running() (in module pyiron_base.jobs.job.extension.server.queuestatus) (pyiron_base.project.generic.Project static method) queue_delete_job() (in module pyiron_base.jobs.job.extension.server.queuestatus) (pyiron_base.project.generic.Project method) queue_enable_reservation() (in module pyiron_base.jobs.job.extension.server.queuestatus) (pyiron_base.project.generic.Project static method) queue_id (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.extension.server.generic.Server property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property)

queue_info_by_job_id() (in module pyiron_base.jobs.job.extension.server.queuestatus) queue_is_empty() (in module pyiron_base.jobs.job.extension.server.queuestatus) (pyiron_base.project.generic.Project static method) queue_list (pyiron_base.jobs.job.extension.server.generic.Server property) queue_table() (in module pyiron_base.jobs.job.extension.server.queuestatus) (pyiron_base.project.generic.Project method) queue_table_global() (pyiron_base.project.generic.Project method) queue_view (pyiron_base.jobs.job.extension.server.generic.Server property)

R

raise_iter() (pyiron_base.utils.parser.Logstatus method) raise_runtimeerror_for_failed_job() (in module pyiron_base.jobs.job.runfunction) read() (in module pyiron_base.storage.fileio) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.inputlist.InputList method) read_dict_from_hdf() (pyiron_base.storage.hdfio.DummyHDFio method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) read_input() (pyiron_base.storage.parameters.GenericParameters method) read_only (pyiron_base.interfaces.lockable.Lockable property) (pyiron_base.jobs.job.extension.server.generic.Server property) (pyiron_base.project.data.ProjectData property) (pyiron_base.storage.datacontainer.DataContainer property) (pyiron_base.storage.datacontainer.DataContainerBase property) (pyiron_base.storage.flattenedstorage.FlattenedStorage property) (pyiron_base.storage.has_stored_traits.HasStoredTraits attribute) (pyiron_base.storage.has_stored_traits.HasStoredTraits property) (pyiron_base.storage.inputlist.InputList property) recursive_dict_resolve() (in module pyiron_base.project.delayed) recursive_load_from_hdf() (in module pyiron_base.jobs.job.base) ref_job (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.parallel.ParallelMaster property) refill_dict() (pyiron_base.jobs.datamining.PyironTable method) refresh() (pyiron_base.jobs.master.submissionstatus.SubmissionStatus method) refresh_job_status() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.generic.Project method) refresh_job_status_based_on_job_id() (pyiron_base.project.generic.Project method) refresh_job_status_based_on_queue_status() (pyiron_base.project.generic.Project method) refresh_status() (pyiron_base.jobs.job.extension.jobstatus.JobStatus method) refresh_submission_status() (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) regexp() (pyiron_base.database.generic.DatabaseAccess static method) register() (in module pyiron_base.cli.cp) (in module pyiron_base.cli.install) (in module pyiron_base.cli.ls) (in module pyiron_base.cli.mv) (in module pyiron_base.cli.reloadfile) (in module pyiron_base.cli.rm) (in module pyiron_base.cli.wrapper) (pyiron_base.database.filetable.FileTableSingleton method) (pyiron_base.jobs.job.jobtype.JobType class method) (pyiron_base.storage.filedata.FileLoader class method) (pyiron_base.storage.has_stored_traits.ABCTraitsMeta method) (pyiron_base.storage.hdfstub.HDFStub class method) register_tools() (pyiron_base.project.generic.Project class method) relocate_hdf5() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) remove() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.generic.Project method) remove_and_reset_id() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) remove_child() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) remove_file() (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) remove_group() (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) remove_job() (pyiron_base.project.generic.Project method) (pyiron_base.storage.hdfio.ProjectHDFio method) remove_jobs() (pyiron_base.project.generic.Project method) remove_keys() (pyiron_base.storage.parameters.GenericParameters method) removedirs() (pyiron_base.project.generic.Project method) (pyiron_base.project.path.ProjectPath method) rename() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) replace_char_dict (pyiron_base.storage.parameters.GenericParameters property) reset_iter() (pyiron_base.utils.parser.Logstatus method) reset_job_id() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) resolve_dynamic_variable() (pyiron_base.utils.parser.LogTag method) restart() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) restart_file_dict (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property)

restart_file_list (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) result() (pyiron_base.project.delayed.JobFuture method) retrieve_job() (in module pyiron_base.jobs.job.extension.server.queuestatus) rewrite_hdf() (pyiron_base.interfaces.has_dict.HasDictfromHDF method) (pyiron_base.interfaces.has_dict.HasHDFfromDict method) (pyiron_base.interfaces.has_hdf.HasHDF method) (pyiron_base.interfaces.object.HasStorage method) (pyiron_base.interfaces.object.PyironObject method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.flattenedstorage.FlattenedStorage method) (pyiron_base.storage.has_stored_traits.HasStoredTraits method) (pyiron_base.storage.inputlist.InputList method) rewrite_hdf5() (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) root_path (pyiron_base.project.generic.Project attribute), [1] (pyiron_base.project.generic.Project property) (pyiron_base.project.path.GenericPath property) (pyiron_base.project.path.ProjectPath attribute) (pyiron_base.project.path.ProjectPath property) (pyiron_base.storage.hdfio.ProjectHDFio property) rows() (pyiron_base.utils.parser.LogTag method) run() (pyiron_base.database.generic.ConnectionWatchDog method) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.job.wrapper.JobWrapper method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) run_if_interactive() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) run_if_interactive_non_modal() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) run_if_lib() (pyiron_base.jobs.script.ScriptJob method) run_if_modal() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) run_if_refresh() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) run_if_scheduler() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) run_job_with_parameter_repair() (in module pyiron_base.jobs.job.runfunction) run_job_with_runmode_executor() (in module pyiron_base.jobs.job.runfunction) run_job_with_runmode_executor_flux() (in module pyiron_base.jobs.job.runfunction) run_job_with_runmode_executor_futures() (in module pyiron_base.jobs.job.runfunction) run_job_with_runmode_manually() (in module pyiron_base.jobs.job.runfunction) run_job_with_runmode_modal() (in module pyiron_base.jobs.job.runfunction) run_job_with_runmode_non_modal() (in module pyiron_base.jobs.job.runfunction) run_job_with_runmode_queue() (in module pyiron_base.jobs.job.runfunction) run_job_with_runmode_srun() (in module pyiron_base.jobs.job.runfunction) run_job_with_status_busy() (in module pyiron_base.jobs.job.runfunction) run_job_with_status_collect() (in module pyiron_base.jobs.job.runfunction) run_job_with_status_created() (in module pyiron_base.jobs.job.runfunction) run_job_with_status_finished() (in module pyiron_base.jobs.job.runfunction) run_job_with_status_initialized() (in module pyiron_base.jobs.job.runfunction) run_job_with_status_refresh() (in module pyiron_base.jobs.job.runfunction) run_job_with_status_running() (in module pyiron_base.jobs.job.runfunction) run_job_with_status_submitted() (in module pyiron_base.jobs.job.runfunction) run_job_with_status_suspended() (in module pyiron_base.jobs.job.runfunction) run_mode (pyiron_base.jobs.job.extension.server.generic.Server property) run_static() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) run_static_with_database() (pyiron_base.jobs.worker.WorkerJob method) run_static_without_database() (pyiron_base.jobs.worker.WorkerJob method) run_time (pyiron_base.jobs.job.extension.server.generic.Server property) run_time_decorator() (in module pyiron_base.jobs.job.runfunction) run_time_to_db() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) Runmode (class in pyiron_base.jobs.job.extension.server.runmode) running() (pyiron_base.project.delayed.JobFuture method)

S

safe_extract() (in module pyiron_base.utils.safetar) sample() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) save() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) save_output() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) script_path (pyiron_base.jobs.script.ScriptJob property) ScriptJob (class in pyiron_base.jobs.script) search() (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.inputlist.InputList method) Selector (class in pyiron_base.project.delayed) self_archive() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) self_unarchive() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) sentinel() (in module pyiron_base.interfaces.lockable) separator_char (pyiron_base.storage.parameters.GenericParameters property) Server (class in pyiron_base.jobs.job.extension.server.generic) server (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) set() (pyiron_base.storage.parameters.GenericParameters method) set_array() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) set_child_id_func() (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) set_dict() (pyiron_base.storage.parameters.GenericParameters method) set_directory() (in module pyiron_base.jobs.flex.pythonfunctioncontainer) set_exception() (pyiron_base.project.delayed.JobFuture method) set_input() (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) set_input_to_read_only() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method)

set_item() (pyiron_base.utils.parser.LogTag method) set_job_status() (in module pyiron_base.database.jobtable) (pyiron_base.database.filetable.FileTable method) (pyiron_base.database.generic.DatabaseAccess method) (pyiron_base.database.interface.IsDatabase method) (pyiron_base.project.generic.Project method) set_job_type() (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) set_logging_level() (pyiron_base.project.generic.Project static method) set_result() (pyiron_base.project.delayed.JobFuture method) set_running_or_notify_cancel() (pyiron_base.project.delayed.JobFuture method) set_trait() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) set_value() (pyiron_base.storage.parameters.GenericParameters method) setDaemon() (pyiron_base.database.generic.ConnectionWatchDog method) setdefault() (pyiron_base.jobs.master.parallel.GenericOutput method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.filedata.OwnNotebookNode method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) setName() (pyiron_base.database.generic.ConnectionWatchDog method) setup_class() (pyiron_base.storage.has_stored_traits.ABCTraitsMeta method) setup_instance() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) setup_logger() (pyiron_base.jobs.job.wrapper.JobWrapper static method) show_hdf() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) signal_intercept() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) size (pyiron_base.project.generic.Project property) split() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) sql_query (pyiron_base.project.generic.Project attribute) (pyiron_base.storage.hdfio.ProjectHDFio property) start() (pyiron_base.database.generic.ConnectionWatchDog method) static_isinstance() (in module pyiron_base.utils.instance) status (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) string (pyiron_base.jobs.job.extension.jobstatus.JobStatus property) (pyiron_base.jobs.master.submissionstatus.SubmissionStatus property) strtobool() (in module pyiron_base.utils.strtobool) SubmissionStatus (class in pyiron_base.jobs.master.submissionstatus) submit_next() (pyiron_base.jobs.master.submissionstatus.SubmissionStatus method) submitted (pyiron_base.jobs.master.submissionstatus.SubmissionStatus property) submitted_jobs (pyiron_base.jobs.master.submissionstatus.SubmissionStatus property) suspend() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) switch_cluster() (pyiron_base.project.generic.Project static method) switch_to_central_database() (pyiron_base.database.manager.DatabaseManager method) (pyiron_base.project.generic.Project method) switch_to_local_database() (pyiron_base.database.manager.DatabaseManager method) (pyiron_base.project.generic.Project method) switch_to_user_mode() (pyiron_base.database.manager.DatabaseManager method) (pyiron_base.project.generic.Project method) switch_to_viewer_mode() (pyiron_base.database.manager.DatabaseManager method) (pyiron_base.project.generic.Project method) symlink() (pyiron_base.project.generic.Project method)

T

table() (pyiron_base.project.generic.Creator method) table_name (pyiron_base.storage.parameters.GenericParameters property) TableJob (class in pyiron_base.jobs.datamining) tag_dict (pyiron_base.utils.parser.LogTag property) tag_first_word (pyiron_base.utils.parser.LogTag property) tag_name (pyiron_base.utils.parser.LogTag property) tail() (pyiron_base.jobs.job.extension.files.File method) (pyiron_base.jobs.job.extension.files.FileBrowser method) TemplateJob (class in pyiron_base.jobs.job.template) test_split() (pyiron_base.utils.parser.LogTag method) threads (pyiron_base.jobs.job.extension.server.generic.Server property) to_builtin() (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.inputlist.InputList method) to_dict() (pyiron_base.interfaces.has_dict.HasDict method) (pyiron_base.interfaces.has_dict.HasDictfromHDF method) (pyiron_base.interfaces.has_dict.HasHDFfromDict method) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.extension.executable.Executable method) (pyiron_base.jobs.job.extension.server.generic.Server method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.flattenedstorage.FlattenedStorage method) (pyiron_base.storage.hdfio.DummyHDFio method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method) (pyiron_base.storage.parameters.GenericParameters method) to_hdf() (pyiron_base.interfaces.has_dict.HasDictfromHDF method) (pyiron_base.interfaces.has_dict.HasHDFfromDict method) (pyiron_base.interfaces.has_hdf.HasHDF method) (pyiron_base.interfaces.object.HasStorage method) (pyiron_base.interfaces.object.PyironObject method) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.extension.server.generic.Server method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.flattenedstorage.FlattenedStorage method) (pyiron_base.storage.has_stored_traits.HasStoredTraits method) (pyiron_base.storage.inputlist.InputList method) (pyiron_base.storage.parameters.GenericParameters method) (pyiron_base.utils.parser.Logstatus method)

to_object() (in module pyiron_base.storage.hdfstub) (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.base.JobCore method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) (pyiron_base.storage.hdfio.DummyHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) to_pandas() (pyiron_base.storage.flattenedstorage.FlattenedStorage method) Toolkit (class in pyiron_base.jobs.job.toolkit) top_path() (pyiron_base.database.manager.DatabaseManager method) total_jobs (pyiron_base.jobs.master.submissionstatus.SubmissionStatus property) total_lst_of_keys() (pyiron_base.jobs.datamining.PyironTable static method) trait_defaults() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) trait_events() (pyiron_base.storage.has_stored_traits.HasStoredTraits class method) trait_has_value() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) trait_metadata() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) trait_names() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) trait_values() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) traits() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) transfer_files() (in module pyiron_base.project.archiving.import_archive) transfer_from_remote() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) translate() (pyiron_base.utils.parser.LogTag method)

U

unit_dict (pyiron_base.utils.units.PyironUnitRegistry property) (pyiron_base.utils.units.PyironUnitRegistry.self attribute) UnitConverter (class in pyiron_base.utils.units) unlink() (pyiron_base.project.generic.Project method) unlock() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) unlocked() (pyiron_base.interfaces.lockable.Lockable method) (pyiron_base.jobs.job.extension.server.generic.Server method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.flattenedstorage.FlattenedStorage method) (pyiron_base.storage.inputlist.InputList method) unobserve() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) unobserve_all() (pyiron_base.storage.has_stored_traits.HasStoredTraits method) unpack() (pyiron_base.project.generic.Project method) unpack_csv() (pyiron_base.project.generic.Project static method) unregister() (pyiron_base.jobs.job.jobtype.JobType class method) update() (pyiron_base.database.filetable.FileTable method) (pyiron_base.database.manager.DatabaseManager method) (pyiron_base.jobs.master.parallel.GenericOutput method) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.filedata.OwnNotebookNode method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method)

update_from_remote() (in module pyiron_base.jobs.job.extension.server.queuestatus) (pyiron_base.project.generic.Project method) update_hdf_types() (pyiron_base.maintenance.generic.LocalMaintenance method) update_id_lst() (in module pyiron_base.project.archiving.import_archive) update_master() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) update_table() (pyiron_base.jobs.datamining.TableJob method) UpdateMaintenance (class in pyiron_base.maintenance.generic) user (pyiron_base.project.generic.Project attribute) (pyiron_base.storage.hdfio.ProjectHDFio property)

V

val_only (pyiron_base.storage.parameters.GenericParameters property) validate_que_request() (in module pyiron_base.jobs.job.extension.server.queuestatus) validate_ready_to_run() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) values() (pyiron_base.jobs.job.path.JobPath method) (pyiron_base.jobs.master.parallel.GenericOutput method) (pyiron_base.project.data.ProjectData method) (pyiron_base.project.generic.Project method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.filedata.OwnNotebookNode method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) (pyiron_base.storage.inputlist.InputList method)

version (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.extension.executable.Executable property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) view_mode (pyiron_base.database.filetable.FileTable property) (pyiron_base.database.generic.DatabaseAccess property) (pyiron_base.database.interface.IsDatabase property) view_queues() (pyiron_base.jobs.job.extension.server.generic.Server static method)

W

wait_for_job() (in module pyiron_base.jobs.job.extension.server.queuestatus) (pyiron_base.project.generic.Project static method) wait_for_jobs() (in module pyiron_base.jobs.job.extension.server.queuestatus) (pyiron_base.project.generic.Project method) wait_for_worker() (pyiron_base.jobs.worker.WorkerJob method) walk() (pyiron_base.project.generic.Project method) (pyiron_base.project.path.ProjectPath method) warn_dynamic_job_classes() (in module pyiron_base.jobs.dynamic) worker_function() (in module pyiron_base.jobs.worker) WorkerJob (class in pyiron_base.jobs.worker) working_directory (pyiron_base.jobs.datamining.TableJob property) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob property) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob property) (pyiron_base.jobs.job.base.JobCore property) (pyiron_base.jobs.job.generic.GenericJob property) (pyiron_base.jobs.job.interactive.InteractiveBase property) (pyiron_base.jobs.job.path.JobPath property) (pyiron_base.jobs.job.template.PythonTemplateJob property) (pyiron_base.jobs.job.template.TemplateJob property) (pyiron_base.jobs.master.flexible.FlexibleMaster property) (pyiron_base.jobs.master.generic.GenericMaster property) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper property) (pyiron_base.jobs.master.list.ListMaster property) (pyiron_base.jobs.master.parallel.ParallelMaster property) (pyiron_base.jobs.script.ScriptJob property) (pyiron_base.jobs.worker.WorkerJob property) (pyiron_base.storage.hdfio.ProjectHDFio property) wrap_executable() (pyiron_base.project.generic.Project method)

wrap_python_function() (pyiron_base.project.generic.Project method) write (pyiron_base.storage.fileio.FileAdapter attribute) write() (in module pyiron_base.storage.fileio) (pyiron_base.project.data.ProjectData method) (pyiron_base.storage.datacontainer.DataContainer method) (pyiron_base.storage.datacontainer.DataContainerBase method) (pyiron_base.storage.inputlist.InputList method) write_dict() (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) write_dict_to_hdf() (pyiron_base.storage.hdfio.DummyHDFio method) (pyiron_base.storage.hdfio.FileHDFio method) (pyiron_base.storage.hdfio.ProjectHDFio method) write_file() (pyiron_base.storage.parameters.GenericParameters method) write_input() (pyiron_base.jobs.datamining.TableJob method) (pyiron_base.jobs.flex.executablecontainer.ExecutableContainerJob method) (pyiron_base.jobs.flex.pythonfunctioncontainer.PythonFunctionContainerJob method) (pyiron_base.jobs.job.generic.GenericJob method) (pyiron_base.jobs.job.interactive.InteractiveBase method) (pyiron_base.jobs.job.template.PythonTemplateJob method) (pyiron_base.jobs.job.template.TemplateJob method) (pyiron_base.jobs.master.flexible.FlexibleMaster method) (pyiron_base.jobs.master.generic.GenericMaster method) (pyiron_base.jobs.master.interactivewrapper.InteractiveWrapper method) (pyiron_base.jobs.master.list.ListMaster method) (pyiron_base.jobs.master.parallel.ParallelMaster method) (pyiron_base.jobs.script.ScriptJob method) (pyiron_base.jobs.worker.WorkerJob method) write_input_files_from_input_dict() (in module pyiron_base.jobs.job.runfunction)